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Generating Reports

 

Overview

GeneLinkerô can generate two types of reports:

For example, generating a single experiment report for a clustering experiment produces a report that includes information just about that clustering experiment.

 

For example, generating a workflow report for the same clustering experiment produces a report that includes information about the original dataset, any intermediate elimination or estimation of missing values, any normalization and/or filtering steps, and the clustering experiment.

 

Information provided in the reports includes (where applicable):

 

Actions

1. Click an item in the Experiments navigator. The item is highlighted.

2. Select Generate Report or Generate Workflow Report from the File menu. The Save As dialog is displayed.

3. Navigate to the folder where the file is to be saved.

4. GeneLinkerô provides a default file name, based on the selected itemís name, with an extension of .html. You may rename the default path and file name by typing over them.

5. Click Save. The report is saved as an HTML file in the specified folder. When the report generation is finished, GeneLinkerô automatically spawns your browser displaying the report. The browser is specified in your user preferences.

Gene Lookup

If the report includes a list of genes (such as the cluster membership list on a partitional clustering experiment, click on one or more gene names to look them up in an external database.

 

Related Topics:

Exporting Data

Exporting Images

Lookup Gene